IL_7AZY_118

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

CU*AUUG

Length

6 nucleotides

Bulged bases

7AZY|1|E|U|3078, 7AZY|1|E|U|3079

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZY_118 not in the Motif Atlas

Homologous match to IL_8C3A_128

Geometric discrepancy: 0.0844

The information below is about IL_8C3A_128

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24807.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

7AZY|1|E|C|3063
7AZY|1|E|U|3064
*
7AZY|1|E|A|3077
7AZY|1|E|U|3078
7AZY|1|E|U|3079
7AZY|1|E|G|3080

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain H

60S ribosomal protein L19-A

Chain n

60S ribosomal protein L31-A