IL_7B5K_085
3D structure
- PDB id
- 7B5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGUAGGAUAG*CC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B5K_085 not in the Motif Atlas
- Geometric match to IL_1KXK_003
- Geometric discrepancy: 0.2938
- The information below is about IL_1KXK_003
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_42626.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 14
Unit IDs
7B5K|1|A|G|2110
7B5K|1|A|U|2111
7B5K|1|A|G|2112
7B5K|1|A|U|2113
7B5K|1|A|A|2114
7B5K|1|A|G|2115
7B5K|1|A|G|2116
7B5K|1|A|A|2117
7B5K|1|A|U|2118
7B5K|1|A|A|2119
7B5K|1|A|G|2120
*
7B5K|1|A|C|2178
7B5K|1|A|C|2179
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 9
- Transfer RNA; tRNA
Coloring options: