IL_7B5K_163
3D structure
- PDB id
- 7B5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCUGCAU*AUG(2MG)C
- Length
- 12 nucleotides
- Bulged bases
- 7B5K|1|a|C|1054
- QA status
- Modified nucleotides: 2MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B5K_163 not in the Motif Atlas
- Homologous match to IL_5J7L_047
- Geometric discrepancy: 0.2059
- The information below is about IL_5J7L_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7B5K|1|a|G|1050
7B5K|1|a|C|1051
7B5K|1|a|U|1052
7B5K|1|a|G|1053
7B5K|1|a|C|1054
7B5K|1|a|A|1055
7B5K|1|a|U|1056
*
7B5K|1|a|A|1204
7B5K|1|a|U|1205
7B5K|1|a|G|1206
7B5K|1|a|2MG|1207
7B5K|1|a|C|1208
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain 6
- mRNA
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
- Chain z
- Transfer RNA; tRNA
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