IL_7B7D_053
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUG*CC
- Length
- 5 nucleotides
- Bulged bases
- 7B7D|1|2|U|1052
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_053 not in the Motif Atlas
- Homologous match to IL_4V88_439
- Geometric discrepancy: 0.5353
- The information below is about IL_4V88_439
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
7B7D|1|2|G|1051
7B7D|1|2|U|1052
7B7D|1|2|G|1053
*
7B7D|1|2|C|1066
7B7D|1|2|C|1067
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain G
- 40S ribosomal protein S17-B
- Chain Q
- 40S ribosomal protein S1-A
- Chain f
- 40S ribosomal protein S27-A
Coloring options: