IL_7B7D_104
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GAAC*GAGUGAAAAAGUAC
- Length
- 18 nucleotides
- Bulged bases
- 7B7D|1|LA|A|398, 7B7D|1|LA|A|402
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_104 not in the Motif Atlas
- Homologous match to IL_5TBW_014
- Geometric discrepancy: 0.0979
- The information below is about IL_5TBW_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60992.7
- Basepair signature
- cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L
- Number of instances in this motif group
- 6
Unit IDs
7B7D|1|LA|G|376
7B7D|1|LA|A|377
7B7D|1|LA|A|378
7B7D|1|LA|C|379
*
7B7D|1|LA|G|390
7B7D|1|LA|A|391
7B7D|1|LA|G|392
7B7D|1|LA|U|393
7B7D|1|LA|G|394
7B7D|1|LA|A|395
7B7D|1|LA|A|396
7B7D|1|LA|A|397
7B7D|1|LA|A|398
7B7D|1|LA|A|399
7B7D|1|LA|G|400
7B7D|1|LA|U|401
7B7D|1|LA|A|402
7B7D|1|LA|C|403
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LC
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LR
- 60S ribosomal protein L17-A
- Chain LU
- 60S ribosomal protein L26-A
- Chain Lh
- 60S ribosomal protein L39
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