IL_7B7D_108
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAUAAAUC*GGAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 7B7D|1|LA|A|519, 7B7D|1|LA|U|520
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_108 not in the Motif Atlas
- Homologous match to IL_5TBW_019
- Geometric discrepancy: 0.1243
- The information below is about IL_5TBW_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74024.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
7B7D|1|LA|G|517
7B7D|1|LA|G|518
7B7D|1|LA|A|519
7B7D|1|LA|U|520
7B7D|1|LA|A|521
7B7D|1|LA|A|522
7B7D|1|LA|A|523
7B7D|1|LA|U|524
7B7D|1|LA|C|525
*
7B7D|1|LA|G|567
7B7D|1|LA|G|568
7B7D|1|LA|A|569
7B7D|1|LA|A|570
7B7D|1|LA|U|571
7B7D|1|LA|A|572
7B7D|1|LA|C|573
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LF
- 60S ribosomal protein L4-A
- Chain LI
- 60S ribosomal protein L7-A
- Chain LO
- 60S ribosomal protein L14-A
- Chain Lo
- 60S ribosomal protein L20-A
Coloring options: