IL_7B7D_148
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UGACGAAG*UCGAA
- Length
- 13 nucleotides
- Bulged bases
- 7B7D|1|LA|C|1391
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_148 not in the Motif Atlas
- Homologous match to IL_5TBW_059
- Geometric discrepancy: 0.079
- The information below is about IL_5TBW_059
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.5
- Basepair signature
- cWW-cWW-tSS-tSH-tHS-cWW-tHS
- Number of instances in this motif group
- 32
Unit IDs
7B7D|1|LA|U|1388
7B7D|1|LA|G|1389
7B7D|1|LA|A|1390
7B7D|1|LA|C|1391
7B7D|1|LA|G|1392
7B7D|1|LA|A|1393
7B7D|1|LA|A|1394
7B7D|1|LA|G|1395
*
7B7D|1|LA|U|1415
7B7D|1|LA|C|1416
7B7D|1|LA|G|1417
7B7D|1|LA|A|1418
7B7D|1|LA|A|1419
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LC
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LF
- 60S ribosomal protein L4-A
- Chain LH
- 60S ribosomal protein L6-B
- Chain LR
- 60S ribosomal protein L17-A
- Chain LU
- 60S ribosomal protein L26-A
- Chain La
- 60S ribosomal protein L32
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