IL_7B7D_151

3D structure

PDB id

7B7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUCAAC*GGAC

Length

10 nucleotides

Bulged bases

7B7D|1|LA|G|1514

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7B7D_151 not in the Motif Atlas

Homologous match to IL_8C3A_066

Geometric discrepancy: 0.1047

The information below is about IL_8C3A_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_93630.2

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

4

Unit IDs

7B7D|1|LA|G|1500
7B7D|1|LA|U|1501
7B7D|1|LA|C|1502
7B7D|1|LA|A|1503
7B7D|1|LA|A|1504
7B7D|1|LA|C|1505
*
7B7D|1|LA|G|1513
7B7D|1|LA|G|1514
7B7D|1|LA|A|1515
7B7D|1|LA|C|1516

Current chains

Chain LA

25S rRNA

Nearby chains

Chain LR

60S ribosomal protein L17-A

Chain Lh

60S ribosomal protein L39

Chain Ln

60S ribosomal protein L19-A