IL_7B7D_177

3D structure

PDB id

7B7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUGAAUG*CGCG

Length

11 nucleotides

Bulged bases

7B7D|1|LA|U|2209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7B7D|1|LA|C|2204
7B7D|1|LA|U|2205
7B7D|1|LA|G|2206
7B7D|1|LA|A|2207
7B7D|1|LA|A|2208
7B7D|1|LA|U|2209
7B7D|1|LA|G|2210
*
7B7D|1|LA|C|2235
7B7D|1|LA|G|2236
7B7D|1|LA|C|2237
7B7D|1|LA|G|2238

Current chains

Chain LA

25S rRNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain LD

60S ribosomal protein L2-A

Chain Q

40S ribosomal protein S1-A