IL_7B7D_179
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GC*GCAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_179 not in the Motif Atlas
- Geometric match to IL_5TBW_089
- Geometric discrepancy: 0.1126
- The information below is about IL_5TBW_089
- Detailed Annotation
- Bulged stacked bases
- Broad Annotation
- Bulged stacked bases
- Motif group
- IL_22551.1
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 9
Unit IDs
7B7D|1|LA|G|2276
7B7D|1|LA|C|2277
*
7B7D|1|LA|G|2307
7B7D|1|LA|C|2308
7B7D|1|LA|A|2309
7B7D|1|LA|U|2310
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain Lj
- 60S ribosomal protein L41-B
- Chain Sn
- Transfer RNA; tRNA
Coloring options: