IL_7B7D_182

3D structure

PDB id

7B7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAA*UACC

Length

7 nucleotides

Bulged bases

7B7D|1|LA|A|2397, 7B7D|1|LA|C|2983

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7B7D_182 not in the Motif Atlas

Homologous match to IL_8C3A_097

Geometric discrepancy: 0.0884

The information below is about IL_8C3A_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54678.7

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

5

Unit IDs

7B7D|1|LA|G|2396
7B7D|1|LA|A|2397
7B7D|1|LA|A|2398
*
7B7D|1|LA|U|2981
7B7D|1|LA|A|2982
7B7D|1|LA|C|2983
7B7D|1|LA|C|2984

Current chains

Chain LA

25S rRNA

Nearby chains

Chain LE

60S ribosomal protein L3

Chain LR

60S ribosomal protein L17-A