IL_7B7D_243
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGU*GAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_243 not in the Motif Atlas
- Geometric match to IL_2R8S_001
- Geometric discrepancy: 0.151
- The information below is about IL_2R8S_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
7B7D|1|2|G|871
7B7D|1|2|G|872
7B7D|1|2|U|873
*
7B7D|1|2|G|954
7B7D|1|2|A|955
7B7D|1|2|C|956
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain Q
- 40S ribosomal protein S1-A
- Chain Y
- 40S ribosomal protein S13
- Chain f
- 40S ribosomal protein S27-A
Coloring options: