IL_7B7D_248

3D structure

PDB id

7B7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UAG*CAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7B7D_248 not in the Motif Atlas

Geometric match to IL_7QQX_005

Geometric discrepancy: 0.3651

The information below is about IL_7QQX_005

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

7B7D|1|2|U|1688
7B7D|1|2|A|1689
7B7D|1|2|G|1690
*
7B7D|1|2|C|1711
7B7D|1|2|A|1712
7B7D|1|2|G|1713

Current chains

Chain 2

18S rRNA

Nearby chains

Chain LS

60S ribosomal protein L24-A