IL_7BGD_049

3D structure

PDB id

7BGD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (body only)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAAGAACAUA*UUGACGGUAC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BGD|1|a|G|454
7BGD|1|a|G|455
7BGD|1|a|A|456
7BGD|1|a|A|457
7BGD|1|a|G|458
7BGD|1|a|A|459
7BGD|1|a|A|460
7BGD|1|a|C|461
7BGD|1|a|A|462
7BGD|1|a|U|463
7BGD|1|a|A|464
*
7BGD|1|a|U|487
7BGD|1|a|U|488
7BGD|1|a|G|489
7BGD|1|a|A|490
7BGD|1|a|C|491
7BGD|1|a|G|492
7BGD|1|a|G|493
7BGD|1|a|U|494
7BGD|1|a|A|495
7BGD|1|a|C|496

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain p

30S ribosomal protein S16