IL_7BL2_087

3D structure

PDB id

7BL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGAG*CGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BL2_087 not in the Motif Atlas

Homologous match to IL_7RQB_089

Geometric discrepancy: 0.1354

The information below is about IL_7RQB_089

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.10

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

33

Unit IDs

7BL2|1|A|C|2350
7BL2|1|A|G|2351
7BL2|1|A|A|2352
7BL2|1|A|G|2353
*
7BL2|1|A|C|2364
7BL2|1|A|G|2365
7BL2|1|A|A|2366
7BL2|1|A|G|2367

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L33

Chain O

50S ribosomal protein L18

Chain W

50S ribosomal protein L27