IL_7BL3_090

3D structure

PDB id

7BL3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCAAG*CGACG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BL3_090 not in the Motif Atlas

Homologous match to IL_5J7L_338

Geometric discrepancy: 0.22

The information below is about IL_5J7L_338

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7BL3|1|A|C|2466
7BL3|1|A|C|2467
7BL3|1|A|A|2468
7BL3|1|A|A|2469
7BL3|1|A|G|2470
*
7BL3|1|A|C|2480
7BL3|1|A|G|2481
7BL3|1|A|A|2482
7BL3|1|A|C|2483
7BL3|1|A|G|2484

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 9P

GTPase ObgE/CgtA