IL_7BL3_115

3D structure

PDB id

7BL3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

7BL3|1|A|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BL3_115 not in the Motif Atlas

Homologous match to IL_5J7L_399

Geometric discrepancy: 0.311

The information below is about IL_5J7L_399

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96236.1

Basepair signature

cWW-tWW-cWW-L-cWW

Number of instances in this motif group

1

Unit IDs

7BL3|1|A|A|844
7BL3|1|A|A|845
7BL3|1|A|U|846
7BL3|1|A|U|847
7BL3|1|A|C|848
*
7BL3|1|A|G|930
7BL3|1|A|U|931
7BL3|1|A|U|932
7BL3|1|A|A|933
7BL3|1|A|U|934

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain Z

50S ribosomal protein L30