IL_7BL5_009

3D structure

PDB id

7BL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

7BL5|1|A|G|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BL5_009 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.3033

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7BL5|1|A|C|274
7BL5|1|A|C|275
7BL5|1|A|U|276
7BL5|1|A|G|277
7BL5|1|A|A|278
7BL5|1|A|A|279
7BL5|1|A|U|280
7BL5|1|A|C|281
*
7BL5|1|A|G|359
7BL5|1|A|U|360
7BL5|1|A|G|361
7BL5|1|A|A|362
7BL5|1|A|G|363

Current chains

Chain A

23S ribosomal RNA

Nearby chains