IL_7BOG_039

3D structure

PDB id

7BOG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state E (body domain)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

7BOG|1|A|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BOG_039 not in the Motif Atlas

Homologous match to IL_6CZR_148

Geometric discrepancy: 0.3853

The information below is about IL_6CZR_148

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.12

Basepair signature

cWW-L-cWW

Number of instances in this motif group

52

Unit IDs

7BOG|1|A|G|925
7BOG|1|A|G|926
7BOG|1|A|G|927
*
7BOG|1|A|U|1390
7BOG|1|A|U|1391

Current chains

Chain A

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S5

Chain V

30S ribosome-binding factor