IL_7BOH_037

3D structure

PDB id

7BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

CAAAC*GGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BOH_037 not in the Motif Atlas

Homologous match to IL_5J7L_037

Geometric discrepancy: 0.0623

The information below is about IL_5J7L_037

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

7BOH|1|A|C|779
7BOH|1|A|A|780
7BOH|1|A|A|781
7BOH|1|A|A|782
7BOH|1|A|C|783
*
7BOH|1|A|G|799
7BOH|1|A|G|800
7BOH|1|A|U|801
7BOH|1|A|A|802
7BOH|1|A|G|803

Current chains

Chain A

RNA (1527-MER)

Nearby chains

Chain K

30S ribosomal protein S11