IL_7BOH_046

3D structure

PDB id

7BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GCU*G(2MG)C

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BOH_046 not in the Motif Atlas

Geometric match to IL_1KFO_003

Geometric discrepancy: 0.1683

The information below is about IL_1KFO_003

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_44258.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

259

Unit IDs

7BOH|1|A|G|1050
7BOH|1|A|C|1051
7BOH|1|A|U|1052
*
7BOH|1|A|G|1206
7BOH|1|A|2MG|1207
7BOH|1|A|C|1208

Current chains

Chain A

RNA (1527-MER)

Nearby chains

Chain C

30S ribosomal protein S3

Chain N

30S ribosomal protein S14