3D structure

PDB id
7BOI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.98 Å

Loop

Sequence
GG*UGC
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7BOI_008 not in the Motif Atlas
Geometric match to IL_6JQ5_004
Geometric discrepancy: 0.3698
The information below is about IL_6JQ5_004
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_00225.14
Basepair signature
cWW-L-cWW
Number of instances in this motif group
50

Unit IDs

7BOI|1|A|G|75
7BOI|1|A|G|76
*
7BOI|1|A|U|93
7BOI|1|A|G|94
7BOI|1|A|C|95

Current chains

Chain A
16S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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