IL_7BOI_044

3D structure

PDB id

7BOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

GGAG*UGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BOI_044 not in the Motif Atlas

Homologous match to IL_4LFB_060

Geometric discrepancy: 0.2019

The information below is about IL_4LFB_060

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

7BOI|1|A|G|1416
7BOI|1|A|G|1417
7BOI|1|A|A|1418
7BOI|1|A|G|1419
*
7BOI|1|A|U|1481
7BOI|1|A|G|1482
7BOI|1|A|A|1483
7BOI|1|A|C|1484

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

30S ribosomal protein S12