IL_7BTB_084
3D structure
- PDB id
- 7BTB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- CUCAUG*CAGUAGAACAAAAGGGUAAAAG
- Length
- 28 nucleotides
- Bulged bases
- 7BTB|1|1|A|2694, 7BTB|1|1|A|2703
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7BTB|1|1|C|2664
7BTB|1|1|U|2665
7BTB|1|1|C|2666
7BTB|1|1|A|2667
7BTB|1|1|U|2668
7BTB|1|1|G|2669
*
7BTB|1|1|C|2685
7BTB|1|1|A|2686
7BTB|1|1|G|2687
7BTB|1|1|U|2688
7BTB|1|1|A|2689
7BTB|1|1|G|2690
7BTB|1|1|A|2691
7BTB|1|1|A|2692
7BTB|1|1|C|2693
7BTB|1|1|A|2694
7BTB|1|1|A|2695
7BTB|1|1|A|2696
7BTB|1|1|A|2697
7BTB|1|1|G|2698
7BTB|1|1|G|2699
7BTB|1|1|G|2700
7BTB|1|1|U|2701
7BTB|1|1|A|2702
7BTB|1|1|A|2703
7BTB|1|1|A|2704
7BTB|1|1|A|2705
7BTB|1|1|G|2706
Current chains
- Chain 1
- RDN25-1 rRNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain D
- 60S ribosomal protein L5
- Chain J
- 60S ribosomal protein L11-A
- Chain v
- Ribosome biogenesis protein RPF2
Coloring options: