IL_7BV8_079

3D structure

PDB id

7BV8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mature 50S ribosomal subunit from RrmJ knock out E.coli strain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

UUGAGCCUUGA*UUUAAUGUUUGA

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BV8|1|A|U|2098
7BV8|1|A|U|2099
7BV8|1|A|G|2100
7BV8|1|A|A|2101
7BV8|1|A|G|2102
7BV8|1|A|C|2103
7BV8|1|A|C|2104
7BV8|1|A|U|2105
7BV8|1|A|U|2106
7BV8|1|A|G|2107
7BV8|1|A|A|2108
*
7BV8|1|A|U|2180
7BV8|1|A|U|2181
7BV8|1|A|U|2182
7BV8|1|A|A|2183
7BV8|1|A|A|2184
7BV8|1|A|U|2185
7BV8|1|A|G|2186
7BV8|1|A|U|2187
7BV8|1|A|U|2188
7BV8|1|A|U|2189
7BV8|1|A|G|2190
7BV8|1|A|A|2191

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L9