IL_7BV8_080

3D structure

PDB id

7BV8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mature 50S ribosomal subunit from RrmJ knock out E.coli strain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

AUGUGUAGGAUAGG*CCCU

Length

18 nucleotides

Bulged bases

7BV8|1|A|U|2111, 7BV8|1|A|G|2116, 7BV8|1|A|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BV8|1|A|A|2108
7BV8|1|A|U|2109
7BV8|1|A|G|2110
7BV8|1|A|U|2111
7BV8|1|A|G|2112
7BV8|1|A|U|2113
7BV8|1|A|A|2114
7BV8|1|A|G|2115
7BV8|1|A|G|2116
7BV8|1|A|A|2117
7BV8|1|A|U|2118
7BV8|1|A|A|2119
7BV8|1|A|G|2120
7BV8|1|A|G|2121
*
7BV8|1|A|C|2177
7BV8|1|A|C|2178
7BV8|1|A|C|2179
7BV8|1|A|U|2180

Current chains

Chain A

23S rRNA

Nearby chains