IL_7BV8_081

3D structure

PDB id

7BV8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mature 50S ribosomal subunit from RrmJ knock out E.coli strain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

UGGGAG*CGACCUUGAAAUACCA

Length

22 nucleotides

Bulged bases

7BV8|1|A|A|2163, 7BV8|1|A|C|2164, 7BV8|1|A|G|2168, 7BV8|1|A|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BV8|1|A|U|2122
7BV8|1|A|G|2123
7BV8|1|A|G|2124
7BV8|1|A|G|2125
7BV8|1|A|A|2126
7BV8|1|A|G|2127
*
7BV8|1|A|C|2161
7BV8|1|A|G|2162
7BV8|1|A|A|2163
7BV8|1|A|C|2164
7BV8|1|A|C|2165
7BV8|1|A|U|2166
7BV8|1|A|U|2167
7BV8|1|A|G|2168
7BV8|1|A|A|2169
7BV8|1|A|A|2170
7BV8|1|A|A|2171
7BV8|1|A|U|2172
7BV8|1|A|A|2173
7BV8|1|A|C|2174
7BV8|1|A|C|2175
7BV8|1|A|A|2176

Current chains

Chain A

23S rRNA

Nearby chains