IL_7BV8_115

3D structure

PDB id

7BV8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mature 50S ribosomal subunit from RrmJ knock out E.coli strain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

CCCAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

7BV8|1|A|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BV8|1|A|C|1043
7BV8|1|A|C|1044
7BV8|1|A|C|1045
7BV8|1|A|A|1046
7BV8|1|A|G|1047
7BV8|1|A|A|1048
7BV8|1|A|C|1049
7BV8|1|A|A|1050
7BV8|1|A|G|1051
7BV8|1|A|C|1052
7BV8|1|A|C|1053
*
7BV8|1|A|G|1106
7BV8|1|A|G|1107
7BV8|1|A|U|1108
7BV8|1|A|C|1109
7BV8|1|A|G|1110
7BV8|1|A|A|1111
7BV8|1|A|G|1112

Current chains

Chain A

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L6

Chain I

50S ribosomal protein L10