IL_7C79_008

3D structure

PDB id

7C79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of yeast Ribonuclease MRP

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUUACAAAAUGG*CAGUAAUAUG

Length

22 nucleotides

Bulged bases

7C79|1|A|U|35, 7C79|1|A|U|36, 7C79|1|A|A|37, 7C79|1|A|C|38, 7C79|1|A|A|40, 7C79|1|A|A|42, 7C79|1|A|U|43, 7C79|1|A|G|44, 7C79|1|A|U|67, 7C79|1|A|A|71, 7C79|1|A|U|72

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7C79|1|A|C|34
7C79|1|A|U|35
7C79|1|A|U|36
7C79|1|A|A|37
7C79|1|A|C|38
7C79|1|A|A|39
7C79|1|A|A|40
7C79|1|A|A|41
7C79|1|A|A|42
7C79|1|A|U|43
7C79|1|A|G|44
7C79|1|A|G|45
*
7C79|1|A|C|64
7C79|1|A|A|65
7C79|1|A|G|66
7C79|1|A|U|67
7C79|1|A|A|68
7C79|1|A|A|69
7C79|1|A|U|70
7C79|1|A|A|71
7C79|1|A|U|72
7C79|1|A|G|73

Current chains

Chain A

Ribonuclease MRP RNA subunit NME1

Nearby chains

Chain B

Ribonucleases P/MRP protein subunit POP1

Chain F

Ribonucleases P/MRP protein subunit POP6

Chain G

Ribonucleases P/MRP protein subunit POP7