IL_7CPJ_186

3D structure

PDB id

7CPJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

ycbZ-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAGGCUUUGAAGUGU*GCAUGGAGCCGACCUUGAAAUAC

Length

39 nucleotides

Bulged bases

7CPJ|1|A|G|2125, 7CPJ|1|A|U|2132, 7CPJ|1|A|U|2166, 7CPJ|1|A|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPJ|1|A|G|2124
7CPJ|1|A|G|2125
7CPJ|1|A|A|2126
7CPJ|1|A|G|2127
7CPJ|1|A|G|2128
7CPJ|1|A|C|2129
7CPJ|1|A|U|2130
7CPJ|1|A|U|2131
7CPJ|1|A|U|2132
7CPJ|1|A|G|2133
7CPJ|1|A|A|2134
7CPJ|1|A|A|2135
7CPJ|1|A|G|2136
7CPJ|1|A|U|2137
7CPJ|1|A|G|2138
7CPJ|1|A|U|2139
*
7CPJ|1|A|G|2152
7CPJ|1|A|C|2153
7CPJ|1|A|A|2154
7CPJ|1|A|U|2155
7CPJ|1|A|G|2156
7CPJ|1|A|G|2157
7CPJ|1|A|A|2158
7CPJ|1|A|G|2159
7CPJ|1|A|C|2160
7CPJ|1|A|C|2161
7CPJ|1|A|G|2162
7CPJ|1|A|A|2163
7CPJ|1|A|C|2164
7CPJ|1|A|C|2165
7CPJ|1|A|U|2166
7CPJ|1|A|U|2167
7CPJ|1|A|G|2168
7CPJ|1|A|A|2169
7CPJ|1|A|A|2170
7CPJ|1|A|A|2171
7CPJ|1|A|U|2172
7CPJ|1|A|A|2173
7CPJ|1|A|C|2174

Current chains

Chain A

23S ribosomal RNA

Nearby chains