IL_7CPV_021

3D structure

PDB id

7CPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome from mouse testis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.03 Å

Loop

Sequence

AUUCAAC*GCGCACUU

Length

15 nucleotides

Bulged bases

7CPV|1|L5|C|695

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPV|1|L5|A|465
7CPV|1|L5|U|466
7CPV|1|L5|U|467
7CPV|1|L5|C|468
7CPV|1|L5|A|469
7CPV|1|L5|A|470
7CPV|1|L5|C|471
*
7CPV|1|L5|G|690
7CPV|1|L5|C|691
7CPV|1|L5|G|692
7CPV|1|L5|C|693
7CPV|1|L5|A|694
7CPV|1|L5|C|695
7CPV|1|L5|U|696
7CPV|1|L5|U|697

Current chains

Chain L5

Mus musculus 28S ribosomal RNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Lr

60S ribosomal protein L28