IL_7CPV_023

3D structure

PDB id

7CPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome from mouse testis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.03 Å

Loop

Sequence

GUGCCCG*CCCGGCC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPV|1|L5|G|492
7CPV|1|L5|U|493
7CPV|1|L5|G|494
7CPV|1|L5|C|495
7CPV|1|L5|C|496
7CPV|1|L5|C|497
7CPV|1|L5|G|498
*
7CPV|1|L5|C|664
7CPV|1|L5|C|665
7CPV|1|L5|C|666
7CPV|1|L5|G|667
7CPV|1|L5|G|668
7CPV|1|L5|C|669
7CPV|1|L5|C|670

Current chains

Chain L5

Mus musculus 28S ribosomal RNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LQ

60S ribosomal protein L18