IL_7CPV_111
3D structure
- PDB id
- 7CPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome from mouse testis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- GGGGGCGAGCCCCGAGGGGCUCUCGCUUCUGGCGCCAAG*CGAC
- Length
- 43 nucleotides
- Bulged bases
- 7CPV|1|L5|C|3754, 7CPV|1|L5|C|3765, 7CPV|1|L5|G|3766, 7CPV|1|L5|U|3768, 7CPV|1|L5|U|3769, 7CPV|1|L5|C|3770, 7CPV|1|L5|U|3771, 7CPV|1|L5|G|3772
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7CPV|1|L5|G|3742
7CPV|1|L5|G|3743
7CPV|1|L5|G|3744
7CPV|1|L5|G|3745
7CPV|1|L5|G|3746
7CPV|1|L5|C|3747
7CPV|1|L5|G|3748
7CPV|1|L5|A|3749
7CPV|1|L5|G|3750
7CPV|1|L5|C|3751
7CPV|1|L5|C|3752
7CPV|1|L5|C|3753
7CPV|1|L5|C|3754
7CPV|1|L5|G|3755
7CPV|1|L5|A|3756
7CPV|1|L5|G|3757
7CPV|1|L5|G|3758
7CPV|1|L5|G|3759
7CPV|1|L5|G|3760
7CPV|1|L5|C|3761
7CPV|1|L5|U|3762
7CPV|1|L5|C|3763
7CPV|1|L5|U|3764
7CPV|1|L5|C|3765
7CPV|1|L5|G|3766
7CPV|1|L5|C|3767
7CPV|1|L5|U|3768
7CPV|1|L5|U|3769
7CPV|1|L5|C|3770
7CPV|1|L5|U|3771
7CPV|1|L5|G|3772
7CPV|1|L5|G|3773
7CPV|1|L5|C|3774
7CPV|1|L5|G|3775
7CPV|1|L5|C|3776
7CPV|1|L5|C|3777
7CPV|1|L5|A|3778
7CPV|1|L5|A|3779
7CPV|1|L5|G|3780
*
7CPV|1|L5|C|3808
7CPV|1|L5|G|3809
7CPV|1|L5|A|3810
7CPV|1|L5|C|3811
Current chains
- Chain L5
- Mus musculus 28S ribosomal RNA
Nearby chains
- Chain LA
- 60S ribosomal protein L8
- Chain LG
- 60S ribosomal protein L7a
- Chain LX
- 60S ribosomal protein L23a
- Chain LZ
- 60S ribosomal protein L27
- Chain Lc
- 60S ribosomal protein L30
- Chain Lg
- 60S ribosomal protein L34
- Chain Lp
- 60S ribosomal protein L37a
- Chain SB
- 40S ribosomal protein S3a
Coloring options: