IL_7CPV_244

3D structure

PDB id

7CPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome from mouse testis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.03 Å

Loop

Sequence

CCCCGC*GCGGAGCG

Length

14 nucleotides

Bulged bases

7CPV|1|S2|C|1754, 7CPV|1|S2|C|1784

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPV|1|S2|C|1751
7CPV|1|S2|C|1752
7CPV|1|S2|C|1753
7CPV|1|S2|C|1754
7CPV|1|S2|G|1755
7CPV|1|S2|C|1756
*
7CPV|1|S2|G|1778
7CPV|1|S2|C|1779
7CPV|1|S2|G|1780
7CPV|1|S2|G|1781
7CPV|1|S2|A|1782
7CPV|1|S2|G|1783
7CPV|1|S2|C|1784
7CPV|1|S2|G|1785

Current chains

Chain S2

Mus musculus 18S ribosomal RNA

Nearby chains

Chain SG

40S ribosomal protein S6