IL_7D4I_076

3D structure

PDB id

7D4I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S small ribosomal precursors complex with the DEAH-box RNA helicase Dhr1 (State F)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUCAGGAUCUGC*GCGGAGAAUUUG

Length

24 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D4I|1|SA|C|1675
7D4I|1|SA|U|1676
7D4I|1|SA|C|1677
7D4I|1|SA|A|1678
7D4I|1|SA|G|1679
7D4I|1|SA|G|1680
7D4I|1|SA|A|1681
7D4I|1|SA|U|1682
7D4I|1|SA|C|1683
7D4I|1|SA|U|1684
7D4I|1|SA|G|1685
7D4I|1|SA|C|1686
*
7D4I|1|SA|G|1715
7D4I|1|SA|C|1716
7D4I|1|SA|G|1717
7D4I|1|SA|G|1718
7D4I|1|SA|A|1719
7D4I|1|SA|G|1720
7D4I|1|SA|A|1721
7D4I|1|SA|A|1722
7D4I|1|SA|U|1723
7D4I|1|SA|U|1724
7D4I|1|SA|U|1725
7D4I|1|SA|G|1726

Current chains

Chain SA

18S rRNA

Nearby chains