IL_7D6Z_038

3D structure

PDB id

7D6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

7D6Z|1|A|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D6Z|1|A|C|1043
7D6Z|1|A|C|1044
7D6Z|1|A|C|1045
7D6Z|1|A|A|1046
7D6Z|1|A|G|1047
7D6Z|1|A|A|1048
7D6Z|1|A|C|1049
7D6Z|1|A|A|1050
7D6Z|1|A|G|1051
7D6Z|1|A|C|1052
*
7D6Z|1|A|G|1107
7D6Z|1|A|U|1108
7D6Z|1|A|C|1109
7D6Z|1|A|G|1110
7D6Z|1|A|A|1111
7D6Z|1|A|G|1112

Current chains

Chain A

23S ribosomal rRNA

Nearby chains

Chain G

50S ribosomal protein L6