IL_7D6Z_191
3D structure
- PDB id
- 7D6Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UGG*CACA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7D6Z_191 not in the Motif Atlas
- Geometric match to IL_4V88_455
- Geometric discrepancy: 0.3119
- The information below is about IL_4V88_455
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7D6Z|1|f|U|952
7D6Z|1|f|G|953
7D6Z|1|f|G|954
*
7D6Z|1|f|C|1226
7D6Z|1|f|A|1227
7D6Z|1|f|C|1228
7D6Z|1|f|A|1229
Current chains
- Chain f
- 16S ribosomal rRNA
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain 4
- Transfer RNA; tRNA
- Chain t
- 30S ribosomal protein S13
- Chain z
- 30S ribosomal protein S19
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