IL_7D6Z_203

3D structure

PDB id

7D6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

7D6Z|1|f|G|251

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7D6Z_203 not in the Motif Atlas

Homologous match to IL_4LFB_012

Geometric discrepancy: 0.1642

The information below is about IL_4LFB_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22002.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

7D6Z|1|f|U|249
7D6Z|1|f|A|250
7D6Z|1|f|G|251
7D6Z|1|f|U|252
*
7D6Z|1|f|A|274
7D6Z|1|f|G|275

Current chains

Chain f

16S ribosomal rRNA

Nearby chains

Chain x

30S ribosomal protein S17