IL_7DLZ_004

3D structure

PDB id

7DLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Methyltransferase Ribozyme

Experimental method

X-RAY DIFFRACTION

Resolution

3.002 Å

Loop

Sequence

UAC*GG

Length

5 nucleotides

Bulged bases

7DLZ|1|Y|A|7

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7DLZ_004 not in the Motif Atlas

Geometric match to IL_7DLZ_001

Geometric discrepancy: 0.1101

The information below is about IL_7DLZ_001

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

129

Unit IDs

7DLZ|1|Y|U|6
7DLZ|1|Y|A|7
7DLZ|1|Y|C|8
*
7DLZ|1|Y|G|39
7DLZ|1|Y|G|40

Current chains

Chain Y

RNA (45-MER)

Nearby chains