IL_7DUJ_065
3D structure
- PDB id
- 7DUJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1,3''Bz bound
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.75 Å
Loop
- Sequence
- AGUUGCCAGCG*CGGGCACUCU
- Length
- 21 nucleotides
- Bulged bases
- 7DUJ|1|A|U|1125, 7DUJ|1|A|C|1129
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7DUJ|1|A|A|1123
7DUJ|1|A|G|1124
7DUJ|1|A|U|1125
7DUJ|1|A|U|1126
7DUJ|1|A|G|1127
7DUJ|1|A|C|1128
7DUJ|1|A|C|1129
7DUJ|1|A|A|1130
7DUJ|1|A|G|1131
7DUJ|1|A|C|1132
7DUJ|1|A|G|1133
*
7DUJ|1|A|C|1141
7DUJ|1|A|G|1142
7DUJ|1|A|G|1143
7DUJ|1|A|G|1144
7DUJ|1|A|C|1145
7DUJ|1|A|A|1146
7DUJ|1|A|C|1147
7DUJ|1|A|U|1148
7DUJ|1|A|C|1149
7DUJ|1|A|U|1150
Current chains
- Chain A
- 30S Ribosomal RNA rRNA
Nearby chains
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
Coloring options: