IL_7DUL_002
3D structure
- PDB id
- 7DUL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N3''MS bound
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.62 Å
Loop
- Sequence
- GU*GAC
- Length
- 5 nucleotides
- Bulged bases
- 7DUL|1|A|A|397
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7DUL_002 not in the Motif Atlas
- Homologous match to IL_4LFB_002
- Geometric discrepancy: 0.1489
- The information below is about IL_4LFB_002
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
7DUL|1|A|G|44
7DUL|1|A|U|45
*
7DUL|1|A|G|396
7DUL|1|A|A|397
7DUL|1|A|C|398
Current chains
- Chain A
- 30S Ribosomal RNA rRNA
Nearby chains
- Chain P
- 30S ribosomal protein S16
Coloring options: