IL_7DUL_060
3D structure
- PDB id
- 7DUL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N3''MS bound
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.62 Å
Loop
- Sequence
- GAC*GUGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7DUL_060 not in the Motif Atlas
- Geometric match to IL_6DME_003
- Geometric discrepancy: 0.317
- The information below is about IL_6DME_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_55516.2
- Basepair signature
- cWW-cWW-cSH-cWW
- Number of instances in this motif group
- 7
Unit IDs
7DUL|1|A|G|654
7DUL|1|A|A|655
7DUL|1|A|C|656
*
7DUL|1|A|G|750
7DUL|1|A|U|751
7DUL|1|A|G|752
7DUL|1|A|A|753
7DUL|1|A|C|754
Current chains
- Chain A
- 30S Ribosomal RNA rRNA
Nearby chains
- Chain H
- 30S ribosomal protein S8
- Chain O
- 30S ribosomal protein S15
- Chain Q
- 30S ribosomal protein S17
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