IL_7ECK_022
3D structure
- PDB id
- 7ECK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RNA duplex containing C-Ag-A and U-Ag-A base pairs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.79 Å
Loop
- Sequence
- GACU(CBR)*GAAUC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: CBR
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ECK|1|G|G|2
7ECK|1|G|A|3
7ECK|1|G|C|4
7ECK|1|G|U|5
7ECK|1|G|CBR|6
*
7ECK|1|H|G|7
7ECK|1|H|A|8
7ECK|1|H|A|9
7ECK|1|H|U|10
7ECK|1|H|C|11
Current chains
- Chain G
- DNA/RNA (5'-R(*GP*GP*AP*CP*U)-D(P*(CBR))-R(P*GP*AP*AP*UP*CP*C)-3')
- Chain H
- DNA/RNA (5'-R(*GP*GP*AP*CP*U)-D(P*(CBR))-R(P*GP*AP*AP*UP*CP*C)-3')
Nearby chains
- Chain E
- DNA/RNA (5'-R(*GP*GP*AP*CP*U)-D(P*(CBR))-R(P*GP*AP*AP*UP*CP*C)-3')
- Chain F
- DNA/RNA (5'-R(*GP*GP*AP*CP*U)-D(P*(CBR))-R(P*GP*AP*AP*UP*CP*C)-3')
- Chain L
- DNA/RNA (5'-R(*GP*GP*AP*CP*U)-D(P*(CBR))-R(P*GP*AP*AP*UP*CP*C)-3')
Coloring options: