3D structure

PDB id
7F5S (explore in PDB, NAKB, or RNA 3D Hub)
Description
human delta-METTL18 60S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
AAGG*CAGCAGCACU
Length
14 nucleotides
Bulged bases
7F5S|1|L5|A|932, 7F5S|1|L5|C|934, 7F5S|1|L5|A|935, 7F5S|1|L5|C|936
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7F5S|1|L5|A|732
7F5S|1|L5|A|733
7F5S|1|L5|G|734
7F5S|1|L5|G|735
*
7F5S|1|L5|C|928
7F5S|1|L5|A|929
7F5S|1|L5|G|930
7F5S|1|L5|C|931
7F5S|1|L5|A|932
7F5S|1|L5|G|933
7F5S|1|L5|C|934
7F5S|1|L5|A|935
7F5S|1|L5|C|936
7F5S|1|L5|U|937

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LC
60S ribosomal protein L4
Chain LM
60S ribosomal protein L14
Chain LS
60S ribosomal protein L18a

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.3755 s