IL_7F5S_064

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CUCGCAGACCCGACGCCCGCCACG*CG

Length

26 nucleotides

Bulged bases

7F5S|1|L5|C|1707, 7F5S|1|L5|G|1708, 7F5S|1|L5|C|1714

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F5S|1|L5|C|1694
7F5S|1|L5|U|1695
7F5S|1|L5|C|1696
7F5S|1|L5|G|1697
7F5S|1|L5|C|1698
7F5S|1|L5|A|1699
7F5S|1|L5|G|1700
7F5S|1|L5|A|1701
7F5S|1|L5|C|1702
7F5S|1|L5|C|1703
7F5S|1|L5|C|1704
7F5S|1|L5|G|1705
7F5S|1|L5|A|1706
7F5S|1|L5|C|1707
7F5S|1|L5|G|1708
7F5S|1|L5|C|1709
7F5S|1|L5|C|1714
7F5S|1|L5|C|1715
7F5S|1|L5|G|1716
7F5S|1|L5|C|1717
7F5S|1|L5|C|1718
7F5S|1|L5|A|1719
7F5S|1|L5|C|1720
7F5S|1|L5|G|1721
*
7F5S|1|L5|C|1841
7F5S|1|L5|G|1842

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

60S ribosomal protein L7

Chain LQ

60S ribosomal protein L18

Chain LT

60S ribosomal protein L21

Chain Lb

60S ribosomal protein L29