IL_7F5S_084
3D structure
- PDB id
- 7F5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human delta-METTL18 60S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- G(OMU)GAAC*GAAC
- Length
- 10 nucleotides
- Bulged bases
- 7F5S|1|L5|A|2428
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7F5S_084 not in the Motif Atlas
- Homologous match to IL_8C3A_066
- Geometric discrepancy: 0.3163
- The information below is about IL_8C3A_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93630.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
7F5S|1|L5|G|2414
7F5S|1|L5|OMU|2415
7F5S|1|L5|G|2416
7F5S|1|L5|A|2417
7F5S|1|L5|A|2418
7F5S|1|L5|C|2419
*
7F5S|1|L5|G|2427
7F5S|1|L5|A|2428
7F5S|1|L5|A|2429
7F5S|1|L5|C|2430
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LP
- 60S ribosomal protein L17
- Chain LR
- 60S ribosomal protein L19
- Chain Ll
- 60S ribosomal protein L39
Coloring options: