IL_7F5S_092

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CAG*CGUG

Length

7 nucleotides

Bulged bases

7F5S|1|L5|U|2687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7F5S_092 not in the Motif Atlas

Geometric match to IL_4V9F_076

Geometric discrepancy: 0.0981

The information below is about IL_4V9F_076

Detailed Annotation

Isolated tHS basepair with bulges

Broad Annotation

No text annotation

Motif group

IL_85599.2

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

9

Unit IDs

7F5S|1|L5|C|2646
7F5S|1|L5|A|2647
7F5S|1|L5|G|2648
*
7F5S|1|L5|C|2685
7F5S|1|L5|G|2686
7F5S|1|L5|U|2687
7F5S|1|L5|G|2688

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Lg

60S ribosomal protein L34