IL_7F5S_152

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

A(OMG)ACAU(PSU)U*AC(B8T)A(PSU)CU

Length

15 nucleotides

Bulged bases

7F5S|1|L5|C|4670

QA status

Modified nucleotides: OMG, PSU, B8T

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F5S|1|L5|A|4622
7F5S|1|L5|OMG|4623
7F5S|1|L5|A|4624
7F5S|1|L5|C|4625
7F5S|1|L5|A|4626
7F5S|1|L5|U|4627
7F5S|1|L5|PSU|4628
7F5S|1|L5|U|4629
*
7F5S|1|L5|A|4669
7F5S|1|L5|C|4670
7F5S|1|L5|B8T|4671
7F5S|1|L5|A|4672
7F5S|1|L5|PSU|4673
7F5S|1|L5|C|4674
7F5S|1|L5|U|4675

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LV

60S ribosomal protein L23

Chain LW

60S ribosomal protein L24