IL_7F5S_160
3D structure
- PDB id
- 7F5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human delta-METTL18 60S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- CCUCGGAUAG*U(OMG)C(2MG)GAGUG
- Length
- 19 nucleotides
- Bulged bases
- 7F5S|1|L5|C|4757, 7F5S|1|L5|U|4758, 7F5S|1|L5|A|4764, 7F5S|1|L5|C|4871, 7F5S|1|L5|G|4873, 7F5S|1|L5|A|4874, 7F5S|1|L5|U|4876
- QA status
- Modified nucleotides: OMG, 2MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7F5S|1|L5|C|4756
7F5S|1|L5|C|4757
7F5S|1|L5|U|4758
7F5S|1|L5|C|4759
7F5S|1|L5|G|4760
7F5S|1|L5|G|4761
7F5S|1|L5|A|4762
7F5S|1|L5|U|4763
7F5S|1|L5|A|4764
7F5S|1|L5|G|4765
*
7F5S|1|L5|U|4869
7F5S|1|L5|OMG|4870
7F5S|1|L5|C|4871
7F5S|1|L5|2MG|4872
7F5S|1|L5|G|4873
7F5S|1|L5|A|4874
7F5S|1|L5|G|4875
7F5S|1|L5|U|4876
7F5S|1|L5|G|4877
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein L6
- Chain LH
- 60S ribosomal protein L9
- Chain LM
- 60S ribosomal protein L14
- Chain LO
- 60S ribosomal protein L13a
- Chain LS
- 60S ribosomal protein L18a
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