IL_7JQC_051
3D structure
- PDB id
- 7JQC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SARS-CoV-2 Nsp1, CrPV IRES and rabbit 40S ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGAC*GUCUUUGG
- Length
- 12 nucleotides
- Bulged bases
- 7JQC|1|A|C|1153, 7JQC|1|A|U|1155, 7JQC|1|A|G|1157
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7JQC|1|A|C|1091
7JQC|1|A|G|1092
7JQC|1|A|A|1093
7JQC|1|A|C|1094
*
7JQC|1|A|G|1151
7JQC|1|A|U|1152
7JQC|1|A|C|1153
7JQC|1|A|U|1154
7JQC|1|A|U|1155
7JQC|1|A|U|1156
7JQC|1|A|G|1157
7JQC|1|A|G|1158
Current chains
- Chain A
- rRNA
Nearby chains
- Chain D
- uS5
- Chain O
- uS17
- Chain P
- uS15
- Chain Y
- uS8
- Chain c
- Uncharacterized protein
- Chain e
- eS27
Coloring options: